Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791619.1_cds_XP_016508207.1_2055
CDS Infomation

[gene=LOC107825799] [db_xref=GeneID:107825799] [protein=polygalacturonase-like isoform X2] [protein_id=XP_016508207.1] [location=join(4236..4436,4596..4724,4854..5021,5320..5527,5652..5733,6148..6256,7096..7212,7324..7502,7774..7843)] [gbkey=CDS]
Sequence

ATGTTTCTTAGAAGCCTTCTTATCTTACTACTAGCCACTTGTTTGCTTTCAACCTTTTGT
AATGGAAAGAAGATTGGAAAACCTATAAAACGTGGTAATAGTAGTGCACCAAAAATTGAT
AATGTGAGGAAAACGCCACAAGTAATTATTGATACACAAGCTTTTGGAGCCAAAGGTGAT
GGACTCACAAATGATACAGAGGCATTTATAAAGGCTTGGAAGAAGGCATGCAAAACAGAA
AATGCTGTGCTTTTGGTGCCAAGGCACAAGAGATATTATGTTGGACCAATTAAATTTCAT
GGTCCTTGCAAGAAAGGCCTTAGAATGATGATAAATGGAGAACTCAGAGCTTCAAAAAAT
ATATCAGATTATGAGCAAGATAGAAGACATTGGCTTTTATTCCAAAACATGGAAAACTTT
ACAGTTGAAGGTGTAGGTAGCATCGATGGCAATGGAGAAGTATGGTGGAAATACTCTTGC
AAAATTGATAAAACAATTGCTATGTTCTTTAATAATTGCACAAATGTGACAGTAAGAAAC
TTAGAGTTCAAGAATCCACAGAAGATGCACTTGACAATTTCTAAAAGTGAGCATGTTGAG
GTTTCAAGATTGAGACTTACAGCACCAGCTGATAGCCCCAACACTGATGGGATTCACGTT
TCTGGGACTAAAGATATTGATATTCACCATTGTTATATTGAAACAGGTGATGATTGTATA
TCAATAGTAAATGGTTCCACAAATGTTAGAGCAAGATACATACATTGCGGACCTGGCCAT
GGAATCAGTATTGGAAGCTTGGGAAAAAATAAAGAGGAGGATGTTGTTTCAAATATTTAT
GTACACGATGCCACCTTGAGGGGAACAACTAATGGATTAAGAATAAAGTCTTGGCAGGGA
GGACGTGGATATGCAAAAAACATTCTTTTTCAAGATATAGAGATGGTGAATGTGACCAAC
CCCATAATCATAGATCAATTTTACTATGACCAAGAAAAACCATGCAAAGAGCAGAAAGAA
GCAGTGCATGTGAGTAATATAATGTACAAAAATATTAAGGGAACGAGTTCCACGCATACT
GCAGTTAAATTAAACTGCAGTAAAACTGTTCCATGCCAAGGGATACAAATGGAAAATGTG
GACATACGTTACCTAGGAGATCCAACTGTTAAAGCTTTATGTGCAAACGTCAAATACACA
ACAAAAGGGGTAGCTTTCCCAAAATGCCCTTCCGAGCGCCCGTGGGCATTTTTATGGAAT
TAA

Peptide Sequence

PEP ID

XP_016508207.1
PEP Infomation

PREDICTED: polygalacturonase-like isoform X2 [Nicotiana tabacum]
Sequence

MFLRSLLILLLATCLLSTFCNGKKIGKPIKRGNSSAPKIDNVRKTPQVIIDTQAFGAKGD
GLTNDTEAFIKAWKKACKTENAVLLVPRHKRYYVGPIKFHGPCKKGLRMMINGELRASKN
ISDYEQDRRHWLLFQNMENFTVEGVGSIDGNGEVWWKYSCKIDKTIAMFFNNCTNVTVRN
LEFKNPQKMHLTISKSEHVEVSRLRLTAPADSPNTDGIHVSGTKDIDIHHCYIETGDDCI
SIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDVVSNIYVHDATLRGTTNGLRIKSWQG
GRGYAKNILFQDIEMVNVTNPIIIDQFYYDQEKPCKEQKEAVHVSNIMYKNIKGTSSTHT
AVKLNCSKTVPCQGIQMENVDIRYLGDPTVKALCANVKYTTKGVAFPKCPSERPWAFLWN

Transcript Sequence

Gene sequence data has not been registered.